YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: GOLS6_ARATH
Organism: Arabidopsis thaliana
Length: 336 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GOLS6_ARATH.

Description E-value Query
Range
Subject
Range
GOLS2_ARATH - Galactinol synthase 2 OS=Arabidopsis thaliana GN=GOLS2 PE=1 SV=1
330.0 [0..1] [336..1]

Back

Predicted Domain #1
Region A:
Residues: [1-336]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAQMSMTVEK SIKADVTVSH DRVKRAYVTF LAGNKDYWMG VVGLAKGLRK VKSAYPLVVA  60
   61 ILPDVPEEHR QILLAQGCII REIEPVYPPE NKTGYSMAYY VINYSKLRIW EFVEYEKMIY 120
  121 LDGDIQVFSN IDHLFDTPRG YLYAVKDCFC EISWSKTPQF KIGYCQQCPE KVTWPVESLG 180
  181 SPPPVYFNAG MLVFEPNLLT YEDLLRVVQI TTPTYFAEQD FLNEYFTDIY KPIPSTYNLV 240
  241 MAMLWRHPEH IDLDQISVIH YCANGSKPWR FDETEEHMDR EDIKMLVKKW WDIYEDSSLD 300
  301 YKNFVETESK LSPINATLAS KESVGDVLIS LAPSAA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 53.30103
Match: 1zcvA
Description: apo form of a mutant of glycogenin in which Asp159 is replaced by Asn
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
transferase activity 0.408140110158132 bayes_pls_golite062009
catalytic activity 0.222379358704242 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle