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View Structure Prediction Details

Protein: HACD_ARATH
Organism: Arabidopsis thaliana
Length: 221 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for HACD_ARATH.

Description E-value Query
Range
Subject
Range
gi|109494481 - gi|109494481|ref|XP_001071670.1| PREDICTED: similar to protein tyrosine phosphatase-like (proline in...
263.0 [0..24] [220..176]

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Predicted Domain #1
Region A:
Residues: [1-221]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGFLSVVRR VYLTLYNWIV FAGWAQVLYL AITTLKETGY ENVYDAIEKP LQLAQTAAVL  60
   61 EILHGLVGLV RSPVSATLPQ IGSRLFLTWG ILYSFPEVRS HFLVTSLVIS WSITEIIRYS 120
  121 FFGFKEALGF APSWHLWLRY SSFLLLYPTG ITSEVGLIYL ALPHIKTSEM YSVRMPNILN 180
  181 FSFDFFYATI LVLAIYVPGS PHMYRYMLGQ RKRALSKSKR E

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 80.769551
Match: PF04387.5
Description: No description for PF04387.5 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle