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View Structure Prediction Details

Protein: ERF73_ARATH
Organism: Arabidopsis thaliana
Length: 211 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ERF73_ARATH.

Description E-value Query
Range
Subject
Range
gi|25406169, gi|... - pir||E96747 hypothetical protein T10D10.17 [imported] - Arabidopsis thaliana, gi|145327221|ref|NP_0...
230.0 [0..3] [211..54]

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Predicted Domain #1
Region A:
Residues: [1-84]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQSFELYPW LGSASDGKKK QSSRYKGIRR RPWGRWAAEI RDPIKGVRVW LGTFNTAEEA  60
   61 ARAYDLEAKR IRGAKAKLNF PNES

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 23.69897
Match: 2gccA
Description: SOLUTION STRUCTURE OF THE GCC-BOX BINDING DOMAIN, NMR, MINIMIZED MEAN STRUCTURE
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.339357445627225 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [85-211]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SGKRKAKAKT VQQVEENHEA DLDVAVVSSA PSSSCLDFLW EENNPDTLLI DTQWLEDIIM  60
   61 GDANKKHEPN DSEEANNVDA SLLSEELLAF ENQTEYFSQM PFTEGNCDSS TSLSSLFDGG 120
  121 NDMGLWS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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