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View Structure Prediction Details

Protein: VA725_ARATH
Organism: Arabidopsis thaliana
Length: 285 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for VA725_ARATH.

Description E-value Query
Range
Subject
Range
VA726_ARATH - Putative vesicle-associated membrane protein 726 OS=Arabidopsis thaliana GN=VAMP726 PE=2 SV=2
260.0 [0..66] [285..1]

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Predicted Domain #1
Region A:
Residues: [1-285]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDRSVVPISL APFQFLLVFW IFLTSVHTNP NKQQKTVVSL SLWWNSKNRI RGCVWFFFLL  60
   61 RVTRTMGQQN LIYSFVARGT VILVEYTEFK GNFTAVAAQC LQKLPSSNNK FTYNCDGHTF 120
  121 NYLVENGFTY CVVAVESVGR QIPMAFLERV KEDFNKRYGG GKATTAQANS LNREFGSKLK 180
  181 EHMQYCVDHP DEISKLAKVK AQVTEVKGVM MENIEKVLDR GEKIELLVDK TENLRSQAQD 240
  241 FRTQGTKIRR KMWFENMKIK LIVLGIIITL ILIIILSVCG GFKCT

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 36.522879
Match: 2nupC
Description: No description for 2nupC was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle