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View Structure Prediction Details

Protein: SRP14_ARATH
Organism: Arabidopsis thaliana
Length: 121 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SRP14_ARATH.

Description E-value Query
Range
Subject
Range
gi|157829621, gi... - gi|5107800|pdb|1914| Chain , Signal Recognition Particle Alu Rna Binding Heterodimer, Srp914, gi|1...
146.0 [0..1] [93..20]

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Predicted Domain #1
Region A:
Residues: [1-121]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVLLQLDPFL NELTSMFEKS KEKGSVWVTL KRSSLKSKVQ KRKLSSVGES IEYRCLIRAT  60
   61 DGKKTVSTSV GAKDHQRFQA SYATILKAHM TALKKRERKD RKKSTEAEKK ESTSTTKSKK 120
  121 L

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 36.0
Match: 1914A
Description: SIGNAL RECOGNITION PARTICLE ALU RNA BINDING HETERODIMER, SRP9/14
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle