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View Structure Prediction Details

Protein: P4H7_ARATH
Organism: Arabidopsis thaliana
Length: 316 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for P4H7_ARATH.

Description E-value Query
Range
Subject
Range
gi|24796986, gi|... - gi|24796986|gb|AAN64505.1| At3g28480/MFJ20_16 [Arabidopsis thaliana], gi|18086437|gb|AAL57673.1| AT3...
345.0 [0..1] [316..1]

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Predicted Domain #1
Region A:
Residues: [1-254]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSRIFLAFS LCFLFTLPLI SSAPNRFLTR SSNTRDGSVI KMKTSASSFG FDPTRVTQLS  60
   61 WTPRVFLYEG FLSDEECDHF IKLAKGKLEK SMVADNDSGE SVESEVRTSS GMFLSKRQDD 120
  121 IVSNVEAKLA AWTFLPEENG ESMQILHYEN GQKYEPHFDY FHDQANLELG GHRIATVLMY 180
  181 LSNVEKGGET VFPMWKGKAT QLKDDSWTEC AKQGYAVKPR KGDALLFFNL HPNATTDSNS 240
  241 LHGSCPVVEG EKWS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 11.0
Match: 2hbtA
Description: No description for 2hbtA was found.

Predicted Domain #2
Region A:
Residues: [255-316]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ATRWIHVKSF ERAFNKQSGC MDENVSCEKW AKAGECQKNP TYMVGSDKDH GYCRKSCKAC  60
   61 SS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle