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View Structure Prediction Details

Protein: NFYA9_ARATH
Organism: Arabidopsis thaliana
Length: 303 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NFYA9_ARATH.

Description E-value Query
Range
Subject
Range
gi|9293997 - gi|9293997|dbj|BAB01900.1| CCAAT-binding transcription factor B subunit [Arabidopsis thaliana]
308.0 [0..6] [303..1]
gi|1586551 - gi|1586551|prf||2204247A CCAAT-binding factor:SUBUNIT=B
277.0 [0..1] [303..13]
gi|50917949, gi|... - gi|50917949|ref|XP_469371.1| putative CCAAT-binding transcription factor [Oryza sativa (japonica cul...
245.0 [0..12] [245..6]
gi|45861211 - gi|45861211|gb|AAS78482.1| CCAAT-box transcription factor complex WHAP8 [Triticum aestivum]
222.0 [0..42] [269..22]

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Predicted Domain #1
Region A:
Residues: [1-150]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGIEDMHSKS DSGGNKVDSE VHGTVSSSIN SLNPWHRAAA ACNANSSVEA GDKSSKSIAL  60
   61 ALESNGSKSP SNRDNTVNKE SQVTTSPQSA GDYSDKNQES LHHGITQPPP HPQLVGHTVG 120
  121 WASSNPYQDP YYAGVMGAYG HHPLGFVPYG 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [151-245]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GMPHSRMPLP PEMAQEPVFV NAKQYQAILR RRQARAKAEL EKKLIKSRKP YLHESRHQHA  60
   61 MRRPRGTGGR FAKKTNTEAS KRKAEEKSNG HVTQS

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 37.431798
Match: PF02045.6
Description: No description for PF02045.6 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [246-303]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PSSSNSDQGE AWNGDYRTPQ GDEMQSSAYK RREEGECSGQ QWNSLSSNHP SQARLAIK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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