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View Structure Prediction Details

Protein: gi|17979329, gi|...
Organism: Arabidopsis thaliana
Length: 242 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|17979329, gi|....

Description E-value Query
Range
Subject
Range
gi|20905935, gi|... - gi|21227554|ref|NP_633476.1| universal stress protein [Methanosarcina mazei Go1], gi|20905935|gb|AAM...
146.0 [0..9] [208..122]

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Predicted Domain #1
Region A:
Residues: [1-242]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNPADSDHPQ LPNIKIHHPP SPRHSHHHHS SSTPSSAATP TPTAGARRKI GVAVDLSEES  60
   61 SFAVRWAVDH YIRPGDAVVL LHVSPTSVLF GADWGPLPLK TQIEDPNAQP QPSQEDFDAF 120
  121 TSTKVADLAK PLKELGFPYK IHIVKDHDMR ERLCLEIERL GLSAVIMGSR GFGAEKKRGS 180
  181 DGKLGSVSDY CVHHCVCPVV VVRYPDDRDG PVPIVTVKSG GDDDGDVVAA SASAHHEHIK 240
  241 DE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 26.045757
Match: 1mjhA
Description: "Hypothetical" protein MJ0577
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.298809327772818 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle