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View Structure Prediction Details

Protein: DAPB2_ARATH
Organism: Arabidopsis thaliana
Length: 349 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DAPB2_ARATH.

Description E-value Query
Range
Subject
Range
gi|42572737 - gi|42572737|ref|NP_974464.1| dihydrodipicolinate reductase family protein [Arabidopsis thaliana]
329.0 [0..7] [349..1]

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Predicted Domain #1
Region A:
Residues: [1-349]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAANGLMAAS SVFLHRPVHP HFSFSSRTNQ MVPLGFKGRV SFIGNVKRCF PVVLSMGKSE  60
   61 TFEEAGNSVA PGNGISIMVN GCSGKMGKAV IKAADSAGVN IVPTSFGSVE EAGQTVEVCG 120
  121 KEILVHGPTE REKVLSSVFE KYPELIVVDY TIPSAVNDNA ELYGKVGVPF VMGTTGGDRT 180
  181 RLYKTVEESK IYAVISPQMG KQVVAFLAAM EIMSEQFPGA FAGYSLEVME SHQASKLDAS 240
  241 GTAKAVISCF QKLGVSYDMD QIQLIRDPKQ QIEVVGVPEE HVSGHAFHLY HLTSPDKTVS 300
  301 FEFQHNVCGR SIYAEGTVDA VLFLAKKIRS KAEKRIYNMI DVLREGNMR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 74.154902
Match: 1arzA
Description: Dihydrodipicolinate reductase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 2.01837452906823 bayes_pls_golite062009
oxidoreductase activity 1.59589847097527 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
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