| Protein: | gi|26451456, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 327 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|26451456, gi|....
| Description | E-value | Query Range |
Subject Range |
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281.0 | [0..1] | [327..1] |
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245.0 | [0..1] | [323..1] |
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228.0 | [0..1] | [326..1] |
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216.0 | [0..1] | [327..2] |
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Region A: Residues: [1-103] |
1 11 21 31 41 51
| | | | | |
1 MLVLRILSRV TRNAGIRSSL SAVTLPARNQ TPVFSSRFHS LAHDFSHKLV PAQMSMMDSF 60
61 ALQRFNFSSS TSPESDEKKT HTEASKTSEE KPTAEANQPG LDS
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.638 | a.188.1 | Description not found. |
| View | Download | 0.560 | a.277.1 | Description not found. |
| View | Download | 0.363 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.363 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.342 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.342 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.335 | a.74.1 | Cyclin-like |
| View | Download | 0.335 | a.74.1 | Cyclin-like |
| View | Download | 0.317 | a.118.13 | Arp2/3 complex 16 kDa subunit ARPC5 |
| View | Download | 0.306 | a.71.1 | Endoplasmic reticulum protein ERP29, C-domain |
|
Region A: Residues: [104-327] |
1 11 21 31 41 51
| | | | | |
1 ESKDSVTDSA KRKRKGAKGA ASSSSESDSE SDDDELSADD LVKLVAEKEE LLSEKEEEIK 60
61 QLKDKVLRTY AEMENVMDRT RRDAENTKKY AVQNFAKSLL DVADNLGRAS SVVKESFSKL 120
121 DTSEDSAGAA PLLKTLLEGV EMTEKQLAEV FKKFGMEKYD PINEPFDPNR HNAVFQVPDA 180
181 SKPEGTVAHV LKSGYTLYDR VIRPAEVGVT QGGENQEEKK ESDA
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| Detection Method: | |
| Confidence: | 37.69897 |
| Match: | 1dkgA |
| Description: | Head domain of nucleotide exchange factor GrpE; Coiled-coil domain of nucleotide exchange factor GrpE |
Matching Structure (courtesy of the PDB): |
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