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View Structure Prediction Details

Protein: GDL79_ARATH
Organism: Arabidopsis thaliana
Length: 366 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GDL79_ARATH.

Description E-value Query
Range
Subject
Range
gi|215765683, gi... - gi|51979502|ref|XP_507548.1| PREDICTED P0643F09.14 gene product [Oryza sativa (japonica cultivar-gro...
344.0 [0..12] [363..15]

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Predicted Domain #1
Region A:
Residues: [1-366]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTNSVAKLAL LGFCILQVTS LLVPQANARA FLVFGDSLVD NGNNDFLATT ARADNYPYGI  60
   61 DFPTHRPTGR FSNGLNIPDL ISEHLGQESP MPYLSPMLKK DKLLRGANFA SAGIGILNDT 120
  121 GIQFLNIIRI TKQLEYFEQY KVRVSGLVGE EEMNRLVNGA LVLITLGGND FVNNYYLVPF 180
  181 SARSRQFSLP DYVVFVISEY RKVLRKMYDL GARRVLVTGT GPMGCVPAEL AQRSRNGECA 240
  241 TELQRAASLF NPQLIQMITD LNNEVGSSAF IAANTQQMHM DFISDPQAYG FVTSKVACCG 300
  301 QGPYNGIGLC TPLSNLCPNR DLFAFWDPFH PSEKASRIIA QQILNGSPEY MHPMNLSTIL 360
  361 TVDSMT

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.17
Match: 1escA
Description: THE MOLECULAR MECHANISM OF ENANTIORECOGNITION BY ESTERASES
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.471286748048633 bayes_pls_golite062009
catalytic activity 0.319044203629006 bayes_pls_golite062009
protein binding 0.0277911089352154 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle