| Protein: | VAP42_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 295 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for VAP42_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
277.0 | [0..1] | [295..1] |
|
Region A: Residues: [1-104] |
1 11 21 31 41 51
| | | | | |
1 MTMTEEKPTS DGKGGWGFFK IPFRNSSGHR NAASSAATSP FPSGASSSST SSHLHNHHQH 60
61 HHQHHHQHHH QLGYNGPHGD GSGQNQHPTP SPSVSSVAKS FLPT
|
| Detection Method: |  |
| Confidence: | 0.988 |
| Match: | 2f93A |
| Description: | K Intermediate Structure of Sensory Rhodopsin II/Transducer Complex in Combination with the Ground State Structure |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [105-295] |
1 11 21 31 41 51
| | | | | |
1 KRRLKLDPSE KLYFPYEPGK QVRSAIKIKN TSKSHVAFKF QTTAPKSCFM RPPGAILAPG 60
61 ETIIATVFKF VEPPENNEKP MDQRSRVKFK IMSLKVKGPM DYVPELFDEQ KDDVSKEQIL 120
121 RVIFLDPERS NPALEKLKRQ LAEADAAVEA RKKPPEETGP KMIGEGLVID EWKERRERYL 180
181 AQQQGEGADS V
|
| Detection Method: | |
| Confidence: | 35.0 |
| Match: | 2criA |
| Description: | Solution structure of the MSP domain of mouse VAMP-associated proteinA |
Matching Structure (courtesy of the PDB): |
|
