| Protein: | ALFL4_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 255 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ALFL4_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
237.0 | [0..1] | [254..1] |
|
Region A: Residues: [1-110] |
1 11 21 31 41 51
| | | | | |
1 MEAGGAYNPR TVEEVFRDFK GRRAGMIKAL TTDVQEFFRL CDPEKENLCL YGHPNEHWEV 60
61 NLPAEEVPPE LPEPVLGINF ARDGMAEKDW LSLVAVHSDA WLLAVAFFFG
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.805 | N/A | N/A | d.57.1 | DNA damage-inducible protein DinI |
| View | Download | 0.585 | N/A | N/A | d.52.3 | Prokaryotic type KH domain (KH-domain type II) |
| View | Download | 0.505 | N/A | N/A | d.58.17 | Metal-binding domain |
| View | Download | 0.445 | N/A | N/A | d.58.44 | Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains |
| View | Download | 0.425 | N/A | N/A | d.52.5 | Probable GTPase Der, C-terminal domain |
|
Region A: Residues: [111-197] |
1 11 21 31 41 51
| | | | | |
1 ARFGFDKADR KRLFNMVNDL PTIFEVVAGT AKKQGKDKSS VSNNSSNRSK SSSKRGSESR 60
61 AKFSKPEPKD DEEEEEEGVE EEDEDEQ
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [198-255] |
1 11 21 31 41 51
| | | | | |
1 GETQCGACGE SYAADEFWIC CDLCEMWFHG KCVKITPARA EHIKQYKCPS CSNKRARS
|
| Detection Method: | |
| Confidence: | 11.154902 |
| Match: | 1we9A |
| Description: | Solution structure of PHD domain in nucleic acid binding protein-like NP_197993 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.24093737575291 | bayes_pls_golite062009 |
