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View Structure Prediction Details

Protein: gi|21592688, gi|...
Organism: Arabidopsis thaliana
Length: 184 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|21592688, gi|....

Description E-value Query
Range
Subject
Range
gi|10178283 - gi|10178283|emb|CAC08341.1| lipoic acid synthase-like protein [Arabidopsis thaliana]
293.0 [0..1] [184..294]

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Predicted Domain #1
Region A:
Residues: [1-89]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTNSYALSPA IIAAVRPPAS QDYLVAASLS GRKSINSSSS SIFVPISLST SYGRSKCAFS  60
   61 ISRKNPKSTI RCDIAVKSAA SVDADADLS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.719 d.50.1 dsRNA-binding domain-like
View Download 0.700 d.17.1 Cystatin/monellin
View Download 0.560 d.17.1 Cystatin/monellin
View Download 0.486 d.17.1 Cystatin/monellin
View Download 0.477 d.50.1 dsRNA-binding domain-like

Predicted Domain #2
Region A:
Residues: [90-184]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SSTSLETEED EKAKEKIGAR VRVTVPLKVY HVVRVPEVEL MGMEGFIKDY VVLWKGKKIS  60
   61 ANLPFKVQFV KEIEGRGPVK FFTHLKEDEF ELIDP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 21.69897
Match: 2pu9B
Description: No description for 2pu9B was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle