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View Structure Prediction Details

Protein: BAM9_ARATH
Organism: Arabidopsis thaliana
Length: 536 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for BAM9_ARATH.

Description E-value Query
Range
Subject
Range
gi|59668410 - gi|59668410|emb|CAI39245.1| beta-amylase [Glycine max]
762.0 [0..1] [536..1]

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Predicted Domain #1
Region A:
Residues: [1-536]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEVSVIGNPQ ARICRAELAY RELGFRFGSD VISGESRNRV SFCNQSSKWK EIAIRCSSRS  60
   61 VKCEAIVSDD ASPFLKSTPK SKSLESVKLF VGLPLDTVSD CNNVNHLKAI TAGLKALKLL 120
  121 GVEGIELPIF WGVVEKEAAG KYEWSGYLAV AEIVKKVGLK LHASLSFHGS KQTEIGLPDW 180
  181 VAKIGDAEPG IYFTDRYGQQ YKDCLSFAVD DVPVLDGKTP MEVYRGFCES FKSAFADYMG 240
  241 NTITGITLGL GPDGELKYPS HQHNAKLSGA GEFQCYDKHM LSALKGYAES TGNPLWGLGG 300
  301 PHDAPAYDQQ PNSSSFFSDG GSWESQYGDF FLSWYSSLLT SHADRVLSVA SSAFSGIGVP 360
  361 LCGKLPLLHQ WHKLRSHPSE LTAGFYSSNG QDRYEAIAEI FAKNSCRMII PGMDLSDEHQ 420
  421 SPESLSSPES LLGHIKTSCK KQGVVVSGQN SSTPVPGGFE RIVENLKDEN VGIDLFTYQR 480
  481 MGALFFSPEH FHAFTVFVRN LSQFELSSDD QASEAEVEAE TASIGSGTGA PSLQTA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 1000.0
Match: 1bfnA
Description: BETA-AMYLASE/BETA-CYCLODEXTRIN COMPLEX
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.32563207632796 bayes_pls_golite062009
hydrolase activity 0.85514037342026 bayes_pls_golite062009
hydrolase activity, acting on glycosyl bonds 0.80912338090552 bayes_pls_golite062009
hydrolase activity, hydrolyzing O-glycosyl compounds 0.41375210927547 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle