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View Structure Prediction Details

Protein: CRIM1_ARATH
Organism: Arabidopsis thaliana
Length: 225 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CRIM1_ARATH.

Description E-value Query
Range
Subject
Range
gi|12323527, gi|... - pir||E86416 unknown protein, 31966-27882 [imported] - Arabidopsis thaliana, gi|12323527|gb|AAG51739...
322.0 [0..1] [224..1]

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Predicted Domain #1
Region A:
Residues: [1-225]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASLCLSSSR IVSLHHQKPF LSLKLRSRPS DLSGLGRHTS PVCFNPLRLS GDRQRTATVS  60
   61 TRVEKRRKRG SSVVCYAAPI SANSLQWIST ISCLALMLAR GTGIHKSVVV PLFALHAPSS 120
  121 IVAWIKGEYG VWAAFLALIA RLFFTFPGEL ELPFIALLLV IVAPYQVMNI RGKQEGAIIA 180
  181 IAISGFLAFQ HFSRAGSLEK AYEKGSVLAT VAIIGVTVVS LLLLL

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 82.275724
Match: PF05562.2
Description: No description for PF05562.2 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle