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View Structure Prediction Details

Protein: COPT5_ARATH
Organism: Arabidopsis thaliana
Length: 146 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for COPT5_ARATH.

Description E-value Query
Range
Subject
Range
gi|45387849, gi|... - gi|45501115|gb|AAH67161.1| Solute carrier family 31 (copper transporters), member 1 [Danio rerio], g...
148.0 [0..1] [142..40]

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Predicted Domain #1
Region A:
Residues: [1-146]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMHMTFYWGI KATILFDFWK TDSWLSYILT LIACFVFSAF YQYLENRRIQ FKSLSSSRRA  60
   61 PPPPRSSSGV SAPLIPKSGT RSAAKAASVL LFGVNAAIGY LLMLAAMSFN GGVFIAIVVG 120
  121 LTAGYAVFRS DDGGADTATD DPCPCA

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 25.065502
Match: PF04145.6
Description: No description for PF04145.6 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle