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View Structure Prediction Details

Protein: ERF76_ARATH
Organism: Arabidopsis thaliana
Length: 166 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ERF76_ARATH.

Description E-value Query
Range
Subject
Range
gi|6560756, gi|2... - gi|6560756|gb|AAF16756.1|AC010155_9 F3M18.20 [Arabidopsis thaliana], pir||B86410 protein F3M18.20 [i...
185.0 [0..1] [166..39]
gi|41351817 - gi|41351817|gb|AAS00621.1| DREB1 [Thellungiella salsuginea]
177.0 [0..3] [163..34]
gi|98980426 - gi|98980426|gb|AAY21899.2| C-repeat binding factor-like protein [Chorispora bungeana]
173.0 [0..3] [163..34]
gi|71983373 - gi|71983373|gb|AAZ57434.1| CRT/DRE binding factor 1 [Iris lactea var. chinensis]
173.0 [0..3] [163..31]
gi|5616086 - gi|5616086|gb|AAD45623.1|AF084185_1 dehydration responsive element binding protein [Brassica napus]
171.0 [0..3] [163..34]

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Predicted Domain #1
Region A:
Residues: [1-79]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPTVKTAAV KTNEGNGVRY RGVRKRPWGR YAAEIRDPFK KSRVWLGTFD TPEEAARAYD  60
   61 KRAIEFRGAK AKTNFPCYN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 20.522879
Match: 2gccA
Description: SOLUTION STRUCTURE OF THE GCC-BOX BINDING DOMAIN, NMR, MINIMIZED MEAN STRUCTURE
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [80-166]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 INAHCLSLTQ SLSQSSTVES SFPNLNLGSD SVSSRFPFPK IQVKAGMMVF DERSESDSSS  60
   61 VVMDVVRYEG RRVVLDLDLN FPPPPEN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle