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View Structure Prediction Details

Protein: gi|18408633, gi|...
Organism: Arabidopsis thaliana
Length: 89 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|18408633, gi|....

Description E-value Query
Range
Subject
Range
gi|116309950 - gi|116309950|emb|CAH66981.1| H0714H04.8 [Oryza sativa (indica cultivar-group)]
gi|113565479, gi... - gi|50928789|ref|XP_473922.1| OSJNBa0058K23.20 [Oryza sativa (japonica cultivar-group)], gi|38344338|...
101.0 [0..1] [87..1]

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Predicted Domain #1
Region A:
Residues: [1-89]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATGNRARPL PKFGEWDATN PGSAEGFTVI FNKARDDKKT MKTAVAGPES IVSPPRNEEP  60
   61 PKNNNNHHHN HHTRHSQTPR SKKKWLCFR

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 59.040959
Match: PF05627.2
Description: No description for PF05627.2 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.466 N/A N/A a.4.9 Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3
View Download 0.349 N/A N/A a.64.1 Saposin
View Download 0.329 N/A N/A a.4.5 "Winged helix" DNA-binding domain
View Download 0.319 N/A N/A c.55.7 Methylated DNA-protein cysteine methyltransferase domain
View Download 0.315 N/A N/A a.46.1 Methionine synthase domain


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