| Protein: | gi|21554742, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 215 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|21554742, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
188.0 | [0..10] | [211..81] |
|
Region A: Residues: [1-120] |
1 11 21 31 41 51
| | | | | |
1 MGGEGEDLEP LFDYRRVQPA NFVCIDDDDD DASVTPIPKK AKTSQTVEKL DDDVKVIEVT 60
61 GDDDWLLPPP KVIFDKSKDS VEDSTIKALR SKKMELMSFT KTVGDVMQEV EESAKREVEE 120
121
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.271 | a.29.2 | Bromodomain |
| View | Download | 0.220 | a.39.1 | EF-hand |
|
Region A: Residues: [121-215] |
1 11 21 31 41 51
| | | | | |
1 SRNPSSETAA QLPSEPTNDR AKIVITIQDK DGQKTLRVFA DEKFERVIKL YTDKAKLDPQ 60
61 NLVFIFDGDK IDPSTTPSEL GMEDHDMIEV HTKKT
|
| Detection Method: | |
| Confidence: | 35.0 |
| Match: | 1wz0A |
| Description: | Solution Structure of Human SUMO-2 (SMT3B), a Ubiquitin-like Protein |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.0934358341245259 | bayes_pls_golite062009 |
| protein binding | 0.03789551947602 | bayes_pls_golite062009 |
