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View Structure Prediction Details

Protein: TRL33_ARATH
Organism: Arabidopsis thaliana
Length: 126 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TRL33_ARATH.

Description E-value Query
Range
Subject
Range
gi|53801490 - gi|53801490|gb|AAU93947.1| thioredoxin H [Helicosporidium sp. ex Simulium jonesii]
124.0 [0..21] [126..3]

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Predicted Domain #1
Region A:
Residues: [1-126]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRKQESEGAN LEFESKSNDN GNVKIAPNDQ SFLTILDDIK SSKSPAVINY GASWCGVCSQ  60
   61 ILPAFRKLSN SFSKLKFVYA DIDECPETTR HIRYTPTFQF YRDGEKVDEM FGAGEQRLHD 120
  121 RLWLHS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 25.39794
Match: 1xflA
Description: Solution Structure of Thioredoxin h1 from Arabidopsis Thaliana
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.142133664747919 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle