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View Structure Prediction Details

Protein: GDL66_ARATH
Organism: Arabidopsis thaliana
Length: 351 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GDL66_ARATH.

Description E-value Query
Range
Subject
Range
gi|51968790 - gi|51968790|dbj|BAD43087.1| putative GDSL-motif lipase/hydrolase [Arabidopsis thaliana]
326.0 [0..1] [350..1]

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Predicted Domain #1
Region A:
Residues: [1-351]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQRNRVLAFL LLAAQLLVKI PETCAKFPAL IVFGDSTVDS GNNNQISTVL KSNFQPYGRD  60
   61 YFDGKATGRF SNGRIAPDFI SEGLGLKNAV PAYLDPAYNI ADFATGVCFA SAGTGLDNAT 120
  121 SAVLSVMPLW KEVEYYKEYQ TRLRSYLGEE KANEIISESL YLISIGTNDF LENYYLLPRK 180
  181 LRKYSVNEYQ YFLIGIAADF VTDIYRLGAR KMSLSGLSPF GCLPLERTTQ LFYGSKCIEE 240
  241 YNIVARDFNI KMEEKVFQLN RDLNGIQLVF SNPYDLVSEI IYHPEAFGFE NVRSACCGTG 300
  301 YYEMSYLCDK MNPFTCSDAS KYVFWDSFHP TEKTNAIVAN HVLKYDLSRF Q

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.23
Match: 1escA
Description: THE MOLECULAR MECHANISM OF ENANTIORECOGNITION BY ESTERASES
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.471286748048633 bayes_pls_golite062009
catalytic activity 0.319044203629006 bayes_pls_golite062009
protein binding 0.0277911089352154 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle