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View Structure Prediction Details

Protein: gi|21280943, gi|...
Organism: Arabidopsis thaliana
Length: 269 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|21280943, gi|....

Description E-value Query
Range
Subject
Range
gi|30695009 - gi|30695009|ref|NP_191509.2| integral membrane HRF1 family protein [Arabidopsis thaliana]
303.0 [0..1] [269..1]

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Predicted Domain #1
Region A:
Residues: [1-103]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYNNMGPQPG MPRPPGNPEP GPFGNPFTGA GSGFIRGGLG AYGERILGSS SEYVQSNISR  60
   61 YFSDPQYYFQ VNDQYVRNKL KVVLFPFLHR GHWTRISEPV GGR

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.870 N/A N/A a.45.1 Glutathione S-transferase (GST), C-terminal domain
View Download 0.819 N/A N/A a.45.1 Glutathione S-transferase (GST), C-terminal domain
View Download 0.694 N/A N/A a.45.1 Glutathione S-transferase (GST), C-terminal domain
View Download 0.633 N/A N/A a.45.1 Glutathione S-transferase (GST), C-terminal domain
View Download 0.619 N/A N/A a.118.9 ENTH/VHS domain

Predicted Domain #2
Region A:
Residues: [104-269]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LSYKPPIYDI NAPDLYIPFM AFGTYVVLAG LSLGLNGKFT PEALNWLFVK GLVGWFLQVM  60
   61 LLKVTLLSLG SGEAPLLDIV AYGGYAFAGL CLAGFAKIMW GYSYYALMPW TCLCTGIFLV 120
  121 KTMKRVLFAE VRSYDSSKHH YLLLFLALVQ FPLLIWLGNI SVNWLL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle