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View Structure Prediction Details

Protein: PLP3B_ARATH
Organism: Arabidopsis thaliana
Length: 230 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PLP3B_ARATH.

Description E-value Query
Range
Subject
Range
gi|10177522 - gi|10177522|dbj|BAB10917.1| unnamed protein product [Arabidopsis thaliana]
151.0 [0..1] [230..1]

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Predicted Domain #1
Region A:
Residues: [1-230]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDPDTVKSTL SNLAFGNVLA AAARDYKKEV LANEKAQGSR PVNEEVDLDE LMDDPELEKL  60
   61 HADRIAALRR EVEKREAFKR QGHGEYREVS EGDFLGEVTR SEKVICHFYH KEFYRCKIMD 120
  121 KHLKTLAPRH VDTKFIKMDA ENAPFFVTKL AIKTLPCVIL FSKGIAMDRL VGFQDLGAKD 180
  181 DFSTTKLENL LVKKGMLSEK RKEEDEEDYE YQESIRRSVR SSANVDSDSD 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 27.0
Match: 2trcP
Description: Phosducin
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.142133664747919 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle