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View Structure Prediction Details

Protein: P4H9_ARATH
Organism: Arabidopsis thaliana
Length: 288 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for P4H9_ARATH.

Description E-value Query
Range
Subject
Range
gi|21537370 - gi|21537370|gb|AAM61711.1| putative prolyl 4-hydroxylase, alpha subunit [Arabidopsis thaliana]
285.0 [0..3] [286..7]

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Predicted Domain #1
Region A:
Residues: [1-85]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSRLKSYRR KKLGLATVIV FCSLCFLFGF YGSTLLSQNV PRVKPRLRML DMVENGEEEA  60
   61 SSMPHGVTGE ESIGSIPFQV LSWRP

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.664 N/A N/A d.109.1 Actin depolymerizing proteins
View Download 0.588 N/A N/A d.109.1 Actin depolymerizing proteins
View Download 0.585 N/A N/A d.109.1 Actin depolymerizing proteins
View Download 0.576 N/A N/A d.58.14 Ribosomal protein S6
View Download 0.576 N/A N/A d.109.1 Actin depolymerizing proteins

Predicted Domain #2
Region A:
Residues: [86-288]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RAIYFPNFAT AEQCQAIIER AKVNLKPSAL ALRKGETAEN TKGTRTSSGT FISASEESTG  60
   61 ALDFVERKIA RATMIPRSHG ESFNILRYEL GQKYDSHYDV FNPTEYGPQS SQRIASFLLY 120
  121 LSDVEEGGET MFPFENGSNM GIGYDYKQCI GLKVKPRKGD GLLFYSVFPN GTIDQTSLHG 180
  181 SCPVTKGEKW VATKWIRDQD QEE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 19.30103
Match: 2hbtA
Description: No description for 2hbtA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle