| Protein: | SRC30_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 262 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SRC30_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
189.0 | [0..31] | [254..175] |
|
Region A: Residues: [1-262] |
1 11 21 31 41 51
| | | | | |
1 MRRYSPPYYS PPRRGYGGRG RSPPPPPPRR GYGGGGGGGG RRGSSHGSLL VRNIPLDCRP 60
61 EELREPFERF GPVRDVYIPR DYYSGQPRGF AFVEFVDAYD AGEAQRSMNR RSFAGREITV 120
121 VVASESRKRP EEMRVKTRTR SREPSGSRDR SHGRSRSRSI SRSRSPRRPS DSRSRYRSRS 180
181 YSPAPRRRGG PPRGEEDENY SRRSYSPGYE GAAAAAPDRD RNGDNEIREK PGYEAEDRRR 240
241 GGRAVSRSPS GSRSRSVEVS PR
|
| Detection Method: |  |
| Confidence: | 33.522879 |
| Match: | 1cvjA |
| Description: | Poly(A)-binding protein |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.950788308762215 | bayes_pls_golite062009 |
| nucleic acid binding | 0.29562225149076 | bayes_pls_golite062009 |
