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View Structure Prediction Details

Protein: gi|21553834, gi|...
Organism: Arabidopsis thaliana
Length: 286 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|21553834, gi|....

Description E-value Query
Range
Subject
Range
gi|7487802, gi|3... - pir||T02368 hypothetical protein T8F5.23 - Arabidopsis thaliana, gi|3335350|gb|AAC27152.1|AAC27152 ...
275.0 [0..1] [286..165]

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Predicted Domain #1
Region A:
Residues: [1-286]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGISTNHTTF DGLSFKTFLE NLASLLHEKP LSTPPCNDRT LLKARDPPSV AFPHHELVKF  60
   61 QDCETTTVFE ATSEHLDFKI FKLSSEQIKK LKERASETSN GNVRVTGFNV VTALVWRCKA 120
  121 LSVAAEEGEE TNLERESTIL YAVDIRGRLN PELPPSYTGN AVLTAYAKEK CKALLEEPFG 180
  181 RIVEMVGEGS KRITDEYARS AIDWGELYKG FPHGEVLVSS WWKLGFAEVE YPWGKPKYSC 240
  241 PVVYHRKDIV LLFPDIDGDS KGVYVLAALP SKEMSKFQHW FEDTLC

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 46.69897
Match: 2bghA
Description: Crystal structure of Vinorine Synthase
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle