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View Structure Prediction Details

Protein: gi|21537291, gi|...
Organism: Arabidopsis thaliana
Length: 306 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|21537291, gi|....

Description E-value Query
Range
Subject
Range
gi|12324641, gi|... - gi|30695366|ref|NP_564615.3| peroxisomal membrane protein-related [Arabidopsis thaliana], pir||H9656...
456.0 [0..1] [305..1]

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Predicted Domain #1
Region A:
Residues: [1-166]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAASLHTSI SPRSFLPLSK PSLKPHRSQI LLRNKQRNCV SCALIRDEID LIPVQSRDRT  60
   61 DHEEGSVVVM STETAVDGNE SVVVGFSAAT SEGQLSLEGF PSSSSSGADL GDEKRRENEE 120
  121 MEKMIDRTIN ATIVLAAGSY AITKLLTIDH DYWHGWTLFE ILRYAP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [167-306]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QHNWIAYEEA LKQNPVLAKM VISGVVYSVG DWIAQCYEGK PLFEIDRART LRSGLVGFTL  60
   61 HGSLSHFYYQ FCEELFPFQD WWVVPVKVAF DQTVWSAIWN SIYFTVLGFL RFESPISIFK 120
  121 ELKATFLPML TVGSFGHLLI 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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