| Protein: | gi|18411885, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 287 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|18411885, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
176.0 | [0..4] | [287..281] |
|
Region A: Residues: [1-106] |
1 11 21 31 41 51
| | | | | |
1 MSQTSYYRSP FGDTTYTKVF VGGLAWETPT DEMRRYFEQF GEILEAVIIT DKNTGKSKGY 60
61 GFVTFRESDS ATRAVADPNP VIDGRKANCN IASFGRPRPS PPRGRG
|
| Detection Method: |  |
| Confidence: | 31.69897 |
| Match: | 1pgzA |
| Description: | Crystal Structure of UP1 Complexed With d(TTAGGGTTAG(6-MI)G); A Human Telomeric Repeat Containing 6-methyl-8-(2-deoxy-beta-ribofuranosyl)isoxanthopteridine (6-MI) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.950788308762215 | bayes_pls_golite062009 |
| nucleic acid binding | 0.29562225149076 | bayes_pls_golite062009 |
|
Region A: Residues: [107-287] |
1 11 21 31 41 51
| | | | | |
1 QTGSPSQYQS GGPSTYTGMA APLPPAAAPQ LMYPSYGYTY NPDQFGYHQA LYNTQLQQAQ 60
61 YYQQQQQLYG GGATSPSSSG ATIMPSPYYY GYSLQAPRVP YQHHHHLPQP YNPQQHHHQR 120
121 FSSPSFLVYP SNSSFAPPLQ GVLSSSTESE AVPQQVPAAE GEATTTAPEI TTSNTKEPIS 180
181 S
|
| Detection Method: | |
| Confidence: | 4.221849 |
| Match: | 1m2vB |
| Description: | Sec24 |
Matching Structure (courtesy of the PDB): |
|
