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View Structure Prediction Details

Protein: TAP46_ARATH
Organism: Arabidopsis thaliana
Length: 405 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TAP46_ARATH.

Description E-value Query
Range
Subject
Range
gi|21553995 - gi|21553995|gb|AAM63076.1| PP2A regulatory subunit [Arabidopsis thaliana]
439.0 [0..1] [405..1]

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Predicted Domain #1
Region A:
Residues: [1-231]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGGLAMEEMP LSVLFEQARK IHLAASESGV DQDVVKKGCE MFQKCEDMIG KLALFSSNET  60
   61 KEDISTNNLK YLLVPYYLAE LTEKIIQEDR IQIVKASYAK LKEFFSFCEA MELVPDEELE 120
  121 ASSRGGSGAP ADRRALKIAR FKRQKAAEAK LLEIKERKER RGRSTKASAL STPVESGEDD 180
  181 IPDDDSEEER EAWLSSINLA ICKAIDLLEM LKREEEMLSA IKERQLKDGE G

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 33.69897
Match: 2v0pA
Description: No description for 2v0pA was found.

Predicted Domain #2
Region A:
Residues: [232-405]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GFSRDALDDR TKKAETWHRD AAARIQYSKP AQPITCATFA QDVLEGRASV SQGHEHKNQP  60
   61 LIFGPASIVG GPLSTERERM IAQVFQPSHR MPTMCIEDAG LTEMNIMNDW QEQTKKAIEE 120
  121 ATTSWYNDKP LRRKEEDEED DDEDEEAVMK ARAFDDWKDD NPRGAGNKKL TPCG

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 8.309804
Match: PF04177.3
Description: No description for PF04177.3 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle