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View Structure Prediction Details

Protein: MGAT1_ARATH
Organism: Arabidopsis thaliana
Length: 444 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MGAT1_ARATH.

Description E-value Query
Range
Subject
Range
gi|18072833 - gi|18072833|emb|CAC80700.1| N-acetylglucosaminyltransferase I [Arabidopsis thaliana]
434.0 [0..1] [444..1]
gi|18076148 - gi|18076148|emb|CAC80702.1| N-acetylglucosaminyltransferase I [Nicotiana tabacum]
432.0 [0..3] [444..5]
gi|18076140 - gi|18076140|emb|CAC80697.1| N-acetylglucosaminyltransferase I [Solanum tuberosum]
422.0 [0..3] [444..5]
gi|27527069 - gi|27527069|emb|CAC82507.1| N-acetylglucosaminyltransferase I [Nicotiana benthamiana]
400.0 [0..24] [444..1]
gi|215715352, gi... - gi|50916195|ref|XP_468560.1| N-acetylglucosaminyltransferase I-like protein [Oryza sativa (japonica ...
gi|20372917 - gi|20372917|emb|CAD30022.1| N-acetylglucosaminyltransferase 1 [Oryza sativa]
369.0 [0..1] [441..1]

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Predicted Domain #1
Region A:
Residues: [1-102]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARISCDLRF LLIPAAFMFI YIQMRLFQTQ SQYADRLSSA IESENHCTSQ MRGLIDEVSI  60
   61 KQSRIVALED MKNRQDEELV QLKDLIQTFE KKGIAKLTQG GQ

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.878 a.1.1 Globin-like

Predicted Domain #2
Region A:
Residues: [103-444]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPVAAVVVMA CSRADYLERT VKSVLTYQTP VASKYPLFIS QDGSDQAVKS KSLSYNQLTY  60
   61 MQHLDFEPVV TERPGELTAY YKIARHYKWA LDQLFYKHKF SRVIILEDDM EIAPDFFDYF 120
  121 EAAASLMDRD KTIMAASSWN DNGQKQFVHD PYALYRSDFF PGLGWMLKRS TWDELSPKWP 180
  181 KAYWDDWLRL KENHKGRQFI RPEVCRTYNF GEHGSSLGQF FSQYLEPIKL NDVTVDWKAK 240
  241 DLGYLTEGNY TKYFSGLVRQ ARPIQGSDLV LKAQNIKDDV RIRYKDQVEF ERIAGEFGIF 300
  301 EEWKDGVPRT AYKGVVVFRI QTTRRVFLVG PDSVMQLGIR NS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 79.045757
Match: 2am3A
Description: No description for 2am3A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle