YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: DTX25_ARATH
Organism: Arabidopsis thaliana
Length: 497 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DTX25_ARATH.

Description E-value Query
Range
Subject
Range
gi|113548993, gi... - gi|115453843|ref|NP_001050522.1| Os03g0571900 [Oryza sativa (japonica cultivar-group)], gi|113548993...
321.0 [0..25] [486..636]

Back

Predicted Domain #1
Region A:
Residues: [1-245]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGGGGEMEE RLLNGSETEQ RRESLYLRKK IWSEVRKMWR IALPSTLFRV MSFGCVVVAQ  60
   61 AFIGHSSETG LAAYALLQST FIRFIYGIMA GMSSATETLC GQAYGAEQYH MMGIYLQRSW 120
  121 IVDTFIATLF VPFIVLAGPI LRLLGQNVVI SETVDEIYPW VIPYLYSIVF TMTMQMYLQA 180
  181 QMKNAIIGIL STLALVLDIA ATWWCVSVMG MGIHGALLGL NISSWSVAIA EFVYVFGGWC 240
  241 PHTWT

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 17.552842
Match: PF01554.9
Description: No description for PF01554.9 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [246-497]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GFSTAAFLDL IPMLKLSISS GFMLCLEYWY MSIIVLMSGY AKDANIAISA FSICQYIYSW  60
   61 EMNICFGLMG AACVRVANEL GKGDADAVRF SIKVVLVVSA VIGVICSALC LAFGGQISYL 120
  121 FSDSQAVSDA VADLSIVLSI SILFNIIQPI LSGVAIGAGM QSMVALVNLA SYYAIGVPLG 180
  181 VLLVYVFNFG IKGLWSGMLA GVGIQTLILC YVIYKTDWEL EVKKTNERMK TWTLNLPAVQ 240
  241 STTISTRDEE RK

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 21.013228
Match: PF01554.9
Description: No description for PF01554.9 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle