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View Structure Prediction Details

Protein: ERG14_ARATH
Organism: Arabidopsis thaliana
Length: 531 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ERG14_ARATH.

Description E-value Query
Range
Subject
Range
gi|12321049, gi|... - pir||C96618 probable squalene monooxygenase F9K23.3 [imported] - Arabidopsis thaliana, gi|12321049|...
363.0 [0..1] [531..1]

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Predicted Domain #1
Region A:
Residues: [1-104]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESQLWNWIL PLLISSLLIS FVAFYGFFVK PKRNGLRHDR KTVSTVTSDV GSVNITGDTV  60
   61 ADVIVVGAGV AGSALAYTLG KDKRRVHVIE RDLSEPDRIV GELL

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.93
Match: 1tt0A
Description: Crystal Structure of Pyranose 2-Oxidase
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [105-531]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QPGGYLKLLE LGIEDCVEEI DAQRVYGYAL FKNGKRIRLA YPLEKFHEDV SGRSFHNGRF  60
   61 IQRMREKAAS LPNVQLEQGT VLSLLEENGT IKGVRYKNKA GEEQTAFAAL TIVCDGCFSN 120
  121 LRRSLCNPQV EVPSCFVGLV LENCNLPYAN HGHVVLADPS PILMYPISST EVRCLVDVPG 180
  181 QKVPSIANGE MKNYLKTVVA PQMPHEVYDS FIAAVDKGNI KSMPNRSMPA SPYPTPGALL 240
  241 MGDAFNMRHP LTGGGMTVAL ADIVVLRNLL RPLRDLSDGA SLCKYLESFY TLRKPVAATI 300
  301 NTLANALYQV FCSSENEARN EMREACFDYL GLGGMCTSGP VSLLSGLNPR PLTLVCHFFA 360
  361 VAVYGVIRLL IPFPSPKRIW LGAKLISGAS GIIFPIIKAE GVRQMFFPAT VPAYYYKAPT 420
  421 VGETKCS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 42.522879
Match: 2qa1A
Description: No description for 2qa1A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle