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View Structure Prediction Details

Protein: CTF50_ARATH
Organism: Arabidopsis thaliana
Length: 429 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CTF50_ARATH.

Description E-value Query
Range
Subject
Range
gi|186464325, gi... - gi|23128981|ref|ZP_00110817.1| COG2319: FOG: WD40 repeat [Nostoc punctiforme PCC 73102], gi|18668187...
481.0 [0..2] [428..1187]

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Predicted Domain #1
Region A:
Residues: [1-110]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGNSGDLEQA LQDGNIFRQL NALIVAHLRH HNLSQVASAV ASATMTPLNI EVPPNRLLEL  60
   61 VAKGLAAENN GTLRGVSSSV LLPSSYGSIT TPRTASIDFS VNHAKGSSKT 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 28.69897
Match: 2pm9A
Description: No description for 2pm9A was found.

Predicted Domain #2
Region A:
Residues: [111-429]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IPKHESKTLS EHKSVVRCAR FSPDGMFFAT GGADTSIKLF EVPKVKQMIS GDTQARPLIR  60
   61 TFYDHAEPIN DLDFHPRSTI LISSAKDNCI KFFDFSKTTA KRAFKVFQDT HNVRSISFHP 120
  121 SGEFLLAGTD HPIPHLYDVN TYQCFLPSNF PDSGVSGAIN QVRYSSTGSI YITASKDGAI 180
  181 RLFDGVSAKC VRSIGNAHGK SEVTSAVFTK DQRFVLSSGK DSTVKLWEIG SGRMVKEYLG 240
  241 AKRVKLRSQA IFNDTEEFVI SIDEASNEVV TWDARTADKV AKWPSNHNGA PRWIEHSPVE 300
  301 SVFVTCGIDR SIRFWKESV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 82.154902
Match: 2gnqA
Description: No description for 2gnqA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle