| Protein: | HDA5_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 660 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for HDA5_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
703.0 | [0..26] | [660..12] |
|
Region A: Residues: [1-461] |
1 11 21 31 41 51
| | | | | |
1 MAMAGESSGK KIGDCDGKVA GNRQRKVGLI YDETMCKHDT PDGEDHPECP DRIRVIWEKL 60
61 QLAGVSQRCV VLGSSKAEDK HLQLVHTKDH VNLVKSISTK QKDYRRNRIA SQLNSIYLNG 120
121 GSSEAAYLAA GSVVKLAEKV AEGELDCGFA IVRPPGHHAE ADEAMGFCLF NNVAVAASFL 180
181 LNERPDLGVK KILIVDWDVH HGNGTQKMFW KDPRVLFFSV HRHEYGGFYP AGDDGDYNMV 240
241 GEGPGEGFNI NVPWDQGRCG DADYLAAWDH ILIPVAREFN PDVIFLSAGF DAAINDPLGG 300
301 CCVTPYGYSV MLKKLMEFAQ GKIVLALEGG YNLDSIAKSS LACVQVLLED KQIQGPPEAY 360
361 PFESTWRVIQ AVRKRLCTYW PSLADELSWK LINQKTPTPI ILISSSDSET EDNAQGLLDQ 420
421 MSKLSIENPQ GTLLENHQVE PASTSWRADL AKVDVWYASF G
|
| Detection Method: |  |
| Confidence: | 98.30103 |
| Match: | 2nvrA |
| Description: | No description for 2nvrA was found. |
|
Region A: Residues: [462-660] |
1 11 21 31 41 51
| | | | | |
1 SNMWKPRFLC YIQGGQVDGL KKVCVGSMDK SPPKETVWET FPHRLFFGRE SSVGWGVGGV 60
61 AFTNPLANLI DQTHMCLYRI TLEQFNDVLS QENGLNVDSD SPVFDLAALQ LVDNKGSILE 120
121 APLNSWYGNV VCLGKERDIP ILTMTCTLSA VEKFKSGEIP IRPPAKAYAN TLIRGLVEGG 180
181 RLSKEEAEAY IDKAVSKPL
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
