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View Structure Prediction Details

Protein: GUN19_ARATH
Organism: Arabidopsis thaliana
Length: 626 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GUN19_ARATH.

Description E-value Query
Range
Subject
Range
gi|4850284, gi|7... - pir||T01929 probable cellulase (EC 3.2.1.4) F2P3.1 - Arabidopsis thaliana, gi|7267803|emb|CAB81206....
762.0 [0..1] [626..1]

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Predicted Domain #1
Region A:
Residues: [1-626]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSRTTISIL VVLLLGLVQL AISGHDYKQA LSKSILFFEA QRSGHLPPNQ RVSWRSHSGL  60
   61 YDGKSSGVDL VGGYYDAGDN VKFGLPMAFT VTTMCWSIIE YGGQLESNGE LGHAIDAVKW 120
  121 GTDYFIKAHP EPNVLYGEVG DGKSDHYCWQ RPEEMTTDRR AYKIDRNNPG SDLAGETAAA 180
  181 MAAASIVFRR SDPSYSAELL RHAHQLFEFA DKYRGKYDSS ITVAQKYYRS VSGYNDELLW 240
  241 AAAWLYQATN DKYYLDYLGK NGDSMGGTGW SMTEFGWDVK YAGVQTLVAK VLMQGKGGEH 300
  301 TAVFERYQQK AEQFMCSLLG KSTKNIKKTP GGLIFRQSWN NMQFVTSASF LATVYSDYLS 360
  361 YSKRDLLCSQ GNISPSQLLE FSKSQVDYIL GDNPRATSYM VGYGENYPRQ VHHRGSSIVS 420
  421 FNVDQKFVTC RGGYATWFSR KGSDPNVLTG ALVGGPDAYD NFADQRDNYE QTEPATYNNA 480
  481 PLLGVLARLI SGSTGFDQLL PGVSPTPSPV IIKPAPVPQR KPTKPPAASS PSPITISQKM 540
  541 TNSWKNEGKV YYRYSTILTN RSTKTLKILK ISITKLYGPI WGVTKTGNSF SFPSWMQSLP 600
  601 SGKSMEFVYI HSASPADVLV SNYSLE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 164.0
Match: 1js4A
Description: Endo/exocellulase:cellobiose E-4, N-terminal domain; Endo/exocellulase:cellobiose E-4, C-terminal domain
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
hydrolase activity, hydrolyzing O-glycosyl compounds 1.97294566761911 bayes_pls_golite062009
hydrolase activity, acting on glycosyl bonds 1.84501307796637 bayes_pls_golite062009
catalytic activity 1.16285856935495 bayes_pls_golite062009
hydrolase activity 0.0225207980048139 bayes_pls_golite062009
trehalase activity 0.0127245623766304 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle