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View Structure Prediction Details

Protein: gi|21689647, gi|...
Organism: Arabidopsis thaliana
Length: 492 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|21689647, gi|....

Description E-value Query
Range
Subject
Range
gi|30690068, gi|... - gi|9294503|dbj|BAB02608.1| phosphonopyruvate decarboxylase-like protein [Arabidopsis thaliana], gi|3...
334.0 [0..3] [492..7]

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Predicted Domain #1
Region A:
Residues: [1-492]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEEVQKRVAF ILIDGLGDVS IPRLGYKTPL QAAEIPNLDA IASAGINGLM DPVEVGLGCG  60
   61 SDTAHLSLMG YDPRVYYRGR GAFESMGAGL AMSPGDIAFK SNFATLDEDS GVVVSRRADR 120
  121 HFEEEGPILC AALDGMKLPS FPEYEVRVRY ATEHRCGVVV KGPKLSGNIS GTDPLKDNRL 180
  181 LLEAKPLDES EEANHTAKVV NELSREISRI LVSHPVNVKR AAQGKNIANL VLLRGCGIRI 240
  241 EVPPFHEKHG LWPCMVAPTK IIAGLGMSLG IDILEALGAT GDYRTLLTSK AIAIANALSA 300
  301 PLNPCPNVFE PAEDGHKPGR SDGYDFGFLH IKAIDDAGHD KATLFKVRGL EAVDKAIRQL 360
  361 AKLLWQAESS SNYQYFLCVT GDHSTPVEYG DHSFEPVPFT MCRLKDFVRA VGGESALLET 420
  421 SLDPFPLPTD IASSENVIGK EEEDCGRREA SLAISGDSVS ELNEIAAARG CLGRFHGGEM 480
  481 MGVITKFLKL DV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 82.522879
Match: 1ejjA
Description: 2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain; 2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, catalytic domain
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
phosphoglycerate mutase activity 4.24148246464219 bayes_pls_golite062009
hydrolase activity 2.90880302900166 bayes_pls_golite062009
catalytic activity 2.68372961800329 bayes_pls_golite062009
hydrolase activity, acting on ester bonds 2.63761290938201 bayes_pls_golite062009
intramolecular transferase activity, phosphotransferases 2.24824132163036 bayes_pls_golite062009
intramolecular transferase activity 1.1848103352875 bayes_pls_golite062009
2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity 0.74674658133561 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle