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View Structure Prediction Details

Protein: P2C02_ARATH
Organism: Arabidopsis thaliana
Length: 380 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for P2C02_ARATH.

Description E-value Query
Range
Subject
Range
gi|25352225, gi|... - gi|8954030|gb|AAF82204.1|AC067971_12 Contains similarity to protein phosphatase 2C from Arabidopsis ...
331.0 [0..1] [380..1]

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Predicted Domain #1
Region A:
Residues: [1-101]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSSVAVCNS PVFSPSSSLF CNKPLNTSPA HETLTLSLSH LNPPVSSTSP SAASPTSPFC  60
   61 LRLLKPPAKL GFGSDSGPGS ILKRKRPTTL DIPVAPVGIA A

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [102-380]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PISNADTPRE ESRAVEREGD GYSVYCKRGK REAMEDRFSA ITNLQGDPKQ AIFGVYDGHG  60
   61 GPTAAEFAAK NLCSNILGEI VGGRNESKIE EAVKRGYLAT DSEFLKEKNV KGGSCCVTAL 120
  121 ISDGNLVVAN AGDCRAVLSV GGFAEALTSD HRPSRDDERN RIESSGGYVD TFNSVWRIQG 180
  181 SLAVSRGIGD AHLKQWIISE PEINILRINP QHEFLILASD GLWDKVSNQE AVDIARPFCK 240
  241 GTDQKRKPLL ACKKLVDLSV SRGSLDDISV MLIQLCHLF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 63.30103
Match: 2p8eA
Description: No description for 2p8eA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle