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View Structure Prediction Details

Protein: gi|42562269, gi|...
Organism: Arabidopsis thaliana
Length: 217 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|42562269, gi|....

Description E-value Query
Range
Subject
Range
gi|110743237, gi... - gi|9954743|gb|AAG09094.1|AC009323_5 Unknown protein [Arabidopsis thaliana], gi|29028828|gb|AAO64793....
251.0 [0..1] [217..1]

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Predicted Domain #1
Region A:
Residues: [1-217]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSEGPKAIT IHVTGFKKFL GVSENPTEKI ANGLKSYVEK RGLPSGLCLG SCSVLDTAGE  60
   61 GAKSKLYEVL ESSVVSGDKN NNGTVVWLHL GVNSGATKFA IERQAVNEAH FRCPDELGWQ 120
  121 PQRLPIVVED GGISKAKETS CSTESIFQLL KKKGFEVVQS DDAGRFVCNY VYYHSLRFAE 180
  181 QKGHKSLFVH VPLFSKIDED TQMQFVASLL EAIAATC

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 64.045757
Match: 1augA
Description: Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase)
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle