| Protein: | RMR2_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 448 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RMR2_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
283.0 | [0..5] | [448..1] |
|
Region A: Residues: [1-157] |
1 11 21 31 41 51
| | | | | |
1 MNRALVLLLY VCTVSCLASS KVILMRNNIT LSFDDIEANF APSVKGTGEI GVVYVAEPLD 60
61 ACQNLMNKPE QSSNETSPFV LIVRGGCSFE EKVRKAQRAG FKAAIIYDNE DRGTLIAMAG 120
121 NSGGIRIHAV FVTKETGEVL KEYAGFPDTK VWLIPSF
|
| Detection Method: |  |
| Confidence: | 1.65 |
| Match: | 1de4C |
| Description: | Transferrin receptor ectodomain, C-terminal domain; Transferrin receptor ectodomain, apical domain; Transferrin receptor ectodomain, protease-like domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [158-292] |
1 11 21 31 41 51
| | | | | |
1 ENSAWSIMAV SFISLLAMSA VLATCFFVRR HRIRRRTSRS SRVREFHGMS RRLVKAMPSL 60
61 IFSSFHEDNT TAFTCAICLE DYTVGDKLRL LPCCHKFHAA CVDSWLTSWR TFCPVCKRDA 120
121 RTSTGEPPAS ESTPL
|
| Detection Method: | |
| Confidence: | 13.522879 |
| Match: | 1fbvA |
| Description: | Cbl; N-terminal domain of cbl (N-cbl); CBL |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.434026084000615 | bayes_pls_golite062009 |
| protein binding | 0.31534665043077 | bayes_pls_golite062009 |
|
Region A: Residues: [293-448] |
1 11 21 31 41 51
| | | | | |
1 LSSAASSFTS SSLHSSVRSS ALLIGPSLGS LPTSISFSPA YASSSYIRQS FQSSSNRRSP 60
61 PISVSRSSVD LRQQAASPSP SPSQRSYISH MASPQSLGYP TISPFNTRYM SPYRPSPSNA 120
121 SPAMAGSSNY PLNPLRYSES AGTFSPYASA NSLPDC
|
| Detection Method: | |
| Confidence: | 1.02 |
| Match: | 2j63A |
| Description: | No description for 2j63A was found. |
