| Protein: | gi|22136838, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 644 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|22136838, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
797.0 | [0..14] | [644..14] |
|
|
788.0 | [0..22] | [605..21] |
|
|
787.0 | [0..22] | [605..20] |
|
|
780.0 | [0..4] | [605..1] |
|
|
779.0 | [0..24] | [606..23] |
|
Region A: Residues: [1-164] |
1 11 21 31 41 51
| | | | | |
1 MASLLRSLIL LLIVQSFLVA IAFGSKEVEE FSEALLLKPL PDRKVLAHFH FENRAPPSNS 60
61 HGRHHHLFPK AISQLVQKFR VKEMELSFTQ GRWNHEHWGG FDPLSSMNAK PVGVELWAVF 120
121 DVPQSQVDTS WKNLTHALSG LFCASINFLE SSTSYAAPTW GFGP
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.603 | N/A | N/A | d.110.4 | SNARE-like |
| View | Download | 0.525 | N/A | N/A | c.16.1 | Lumazine synthase |
| View | Download | 0.480 | N/A | N/A | d.51.1 | Eukaryotic type KH-domain (KH-domain type I) |
| View | Download | 0.473 | N/A | N/A | d.58.21 | Molybdenum cofactor biosynthesis protein C, MoaC |
| View | Download | 0.469 | N/A | N/A | a.142.1 | PTS-regulatory domain, PRD |
|
Region A: Residues: [165-245] |
1 11 21 31 41 51
| | | | | |
1 NSDKLRYGSL PREAVCTENL TPWLKLLPCR DKDGISALMN RPSVYRGFYH SQRLHLSTVE 60
61 SGQEGLGSGI VLEQTLTVVL Q
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.579 | a.218.1 | Description not found. |
| View | Download | 0.563 | d.110.3 | PYP-like sensor domain (PAS domain) |
| View | Download | 0.563 | d.110.3 | PYP-like sensor domain (PAS domain) |
| View | Download | 0.445 | d.110.3 | PYP-like sensor domain (PAS domain) |
| View | Download | 0.445 | d.110.3 | PYP-like sensor domain (PAS domain) |
| View | Download | 0.440 | a.4.1 | Homeodomain-like |
| View | Download | 0.437 | d.129.5 | Description not found. |
| View | Download | 0.397 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.388 | a.4.1 | Homeodomain-like |
|
Region A: Residues: [246-343] |
1 11 21 31 41 51
| | | | | |
1 PETTSVESNM QPSWSLSSLF GRQVVGRCVL AKSSNVYLQL EGLLGYESKN VDTEIEAHQL 60
61 WKNAEFELSL KPERVIRESC SFLFIFDIDK SSDSEPFD
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.531 | N/A | N/A | d.52.6 | BolA-like |
| View | Download | 0.307 | N/A | N/A | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.307 | N/A | N/A | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.288 | N/A | N/A | a.156.1 | S13-like H2TH domain |
| View | Download | 0.254 | N/A | N/A | a.4.1 | Homeodomain-like |
| View | Download | 0.252 | N/A | N/A | a.61.1 | Retroviral matrix proteins |
| View | Download | 0.252 | N/A | N/A | d.58.7 | RNA-binding domain, RBD |
| View | Download | 0.243 | N/A | N/A | d.67.2 | Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain |
|
Region A: Residues: [344-644] |
1 11 21 31 41 51
| | | | | |
1 LGLTWKRPSK WSCQQAPLHS SRFLMGSGNE RGAIAILLKA TESQEKLSGR DLTNGQCTIK 60
61 ANIFQIFPWY IKVYYHTLQI FVDQQQKTDS EVLKKINVSP STDKVSSGMM EMMLELPCEV 120
121 KSVAISIEYD KGFLHIDEYP PDANQGFDIP SALISFPDHH ASLDFQEELS NSPLLSSLKE 180
181 KSLVRSYTEV LLVPLTTPDF SMPYNVITIT CTIFALYFGS LLNVLRRRIG EEERFLKSQA 240
241 GKKTGGLKQL LSRITAKIRG RPIEAPSSSE AESSVLSSKL ILKIILVAGA AAAWQYFSTD 300
301 E
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
