| Protein: | SEC6_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 752 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SEC6_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
552.0 | [0..2] | [752..1] |
|
Region A: Residues: [1-318] |
1 11 21 31 41 51
| | | | | |
1 MMVEDLGVEA KEAAVREVAK LLPLPELLQS ISSIKADYIA RQQANDAQLS TMVAEQVEQA 60
61 QAGLESLSSS EKTIYELRDN FISIDKLCQE CQTLIDNHDQ IKLLSNARNN LNKTLKDVEG 120
121 MMSISVEAAA ARDSLSDDKE IVNTYERLTA LDGKRRFALA AAGEEVGRLR EYFEDVDRTW 180
181 ETFEKTLWGH VSNYYKLSKE SPQTLVRALR VVEMQEILDQ QLAEEAAEAE GEGAMASVAN 240
241 PRRPGKKSTT TSASSKGLAQ QKLKVQGKGY KDKCYEQIRK AVEDRFNRLL TLVFEDLKAA 300
301 LEEARMIGEE LGDIYDYV
|
| Detection Method: |  |
| Confidence: | 18.30103 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [319-752] |
1 11 21 31 41 51
| | | | | |
1 APCFPPRYEI FQLMVNLYTE RFIQMLRLLS DRANDLTNIE ILKVTGWVVE YQENLIALGV 60
61 DDSLAQVCSE SGSMDPLMNA YVERMQATTK KWYMNILEAD KVQPPKKTEE GKLYTPAAVD 120
121 LFRILGEQVQ IVRDNSTDVM LYRIALAIIQ VMIDFQAAEK KRVDEPASDI GLEPLCAMIN 180
181 NNLRCYDLAM ELSNSTLEAL PQNYAEQVNF EDTCKGFLEV AKEAVHQTVR VIFEDPGVQE 240
241 LLVKLYQKEW CEGQVTEYLV ATFGDYFTDV KMYVEERSFR RFVEACLEET VVVYVDHLLT 300
301 QKNYIKEETI ERMRLDEEVL MDFFREYISA SKVESRIRIM SDLRELASAE SLDAFTLVYS 360
361 NILEHQPDCP AEVVEKLVSL REGIPRKDTK EVVQECKEIY ENTLVDGNPP KTGFVFPRVK 420
421 CLTASKGSMW RKLT
|
| Detection Method: | |
| Confidence: | 67.522879 |
| Match: | 2fji1 |
| Description: | No description for 2fji1 was found. |
