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View Structure Prediction Details

Protein: SIA2_ARATH
Organism: Arabidopsis thaliana
Length: 440 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SIA2_ARATH.

Description E-value Query
Range
Subject
Range
gi|42572617 - gi|42572617|ref|NP_974404.1| glycosyl transferase family 29 protein / sialyltransferase family prote...
523.0 [0..13] [440..13]

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Predicted Domain #1
Region A:
Residues: [1-83]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLLHLIFLL ALTTGISAVL IYIIGVSNLY ESNRFTNEDL EALQSLQNGF QKCVSANGLG  60
   61 LQAAMGRDYC KVSINFPKDT VPK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [84-147]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 WKDPKSGELE GLSYEFDLCE AVATWEQVRN SSTILTKEYI DALPNGWEDY AWRRINKGIQ  60
   61 LNRC

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [148-346]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QNKSLCIEKL SLVLPETPPY FPRQFGRCAV IGNSGDLLKT KFGKEIDTYD TVLRENGAPI  60
   61 QNYKEYVGEK STFRLLNRGS AKALDKVVEL DEKKQEVLLV KTTIHDIMNK MIREVPIKNP 120
  121 VYLMLGASFG SAAKGTGLKA LEFALSTCDS VDMYGFTVDP GYKEWTRYFS ESRQGHTPLH 180
  181 GRAYYQMMEC LGLIKIHSP

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [347-440]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRADPNRVVK WVPSRSTIRS ARIAAEKLLR RVGAGSADPL ASCSIVKKRN KNKRPMVSHL  60
   61 RKPVSDHQKF VRSTSMYPVE HSPGHGQLCI TPAD

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle