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View Structure Prediction Details

Protein: gi|22136786, gi|...
Organism: Arabidopsis thaliana
Length: 173 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|22136786, gi|....

Description E-value Query
Range
Subject
Range
gi|42552211, gi|... - gi|46123469|ref|XP_386288.1| hypothetical protein FG06112.1 [Gibberella zeae PH-1], gi|42552211|gb|E...
125.0 [0..12] [166..27]

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Predicted Domain #1
Region A:
Residues: [1-173]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASLGFNLGF TFSNAQIQQH RKVSGGGRAR VISCNSSSSS SSQASSPQGI SAVTPLEIEL  60
   61 EFFGPKPGSD GSYPVDKAKA VSGDKLLRSI MQDNKIELYA AYGKVMNCGG GGSCGTCIVE 120
  121 ILDGRDLLNE RTDTENRYLK KKPESWRLAC QTIVGNKENS GKVVVQRIPQ WKK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 25.39794
Match: 1rfkA
Description: Crystal Structure of 2Fe2S Ferredoxin from Thermophilic Cyanobacterium Mastigocladus Laminosus
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle