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View Structure Prediction Details

Protein: FLA18_ARATH
Organism: Arabidopsis thaliana
Length: 462 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FLA18_ARATH.

Description E-value Query
Range
Subject
Range
FLA17_ARATH - Fasciclin-like arabinogalactan protein 17 OS=Arabidopsis thaliana GN=FLA17 PE=2 SV=1
424.0 [0..1] [462..1]

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Predicted Domain #1
Region A:
Residues: [1-245]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDRCIYGCSV ITIFFSFFFL LNASALESGH HNITGSGQIN SNSVLVALLD SRYTELAELV  60
   61 EKALLLQTLE DAVGRHNITI FAPRNEALER DLDPDFKRFL LQPGNLKSLQ TLLLSHIIPK 120
  121 RVGSNQWPEE NSGRVKHVTL GHDQVLHLSK LKGTNGKRLV NSAVITRPDD LTRPDGLIHG 180
  181 IERLLIPRSV QEDFNRRRNL RSISAVLPEG APEIDPRTNR LKKSATAVSV PAGSPPVLPI 240
  241 ESAMA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 24.69897
Match: 1w7dA
Description: No description for 1w7dA was found.

Predicted Domain #2
Region A:
Residues: [246-462]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PGPSLAPAPA PGPGGAHKHF NGDAQVKDFI HTLLHYGGYN EMADILVNLT SLATEMGRLV  60
   61 SEGYVLTVLA PNDEAMGKLT TDQLSEPGAP EQIMYYHIIP EYQTEESMYN SVRRFGKVKY 120
  121 ETLRFPHKVG AKEADGSVKF GSGDRSAYLF DPDIYTDGRI SVQGIDGVLF PEEKEEETVK 180
  181 KPTGPVKKVV QPRRGKLLEV ACSMLGAIGK DSYLSRC

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 15.0
Match: 1nyoA
Description: Solution structure of the antigenic TB protein MPT70/MPB70
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle