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View Structure Prediction Details

Protein: gi|22326858, gi|...
Organism: Arabidopsis thaliana
Length: 644 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|22326858, gi|....

Description E-value Query
Range
Subject
Range
gi|49094466, gi|... - gi|67536774|ref|XP_662161.1| hypothetical protein AN4557.2 [Aspergillus nidulans FGSC A4], ref|XP_40...
278.0 [0..16] [641..29]

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Predicted Domain #1
Region A:
Residues: [1-168]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAQKIAIGVI SALAASASLA PSKFAAADGP FTFSGFSTSP SASIPQQQGS TPPASESGKE  60
   61 PSVAGEESDA PPRIRNNNPR TTSAGFDPEA LERGAKALKG INNSAHAKKV FESIKTREET 120
  121 RQAEFTAKAQ EFKAMQSQAE AERQRVIYEE QKKLAQHQAQ TKSQMARY

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 0.991
Match: 2qagC
Description: No description for 2qagC was found.

Predicted Domain #2
Region A:
Residues: [169-644]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EDELARKRMQ AENEAQRTRN QELVKMQEES AIRREVARRA TEEEIQAQRR QTEREKAEIE  60
   61 RETIRVKAMA EAEGRARESK LSEDVNRRML VDRANAEREK WVSAINTTFD HIGGGLRTIL 120
  121 TDQNKLIVAV GGLTALAAGI YTTREGAKVI WSYVDRILGQ PSLIRESSRG KYPWSGSASR 180
  181 VLSTLRGGGK ESTSKTGKGF GDVILRPALE KRIEQLANAT ANTKAHQAPF RNILFYGPPG 240
  241 TGKTMAAREL ARRSGLDYAL MTGGDVAPLG AQAVTKIHQL FDWSKKSKRG LLLFIDEADA 300
  301 FLCERNKTYM SEAQRSALNA LLFRTGDQSK DIVLALATNR PGDLDSAVAD RIDETLEFPL 360
  361 PGEEERFKLL NLYLEKYISK TNLKKPGLLQ SLFKKEQQTI EIKGVTEDLL KEAAAKTKGF 420
  421 SGREIAKLMA SVQAAVYGSA NCLLDANLFR EVIDYKVAEH QQRKKLAGTD AGNKKK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 59.522879
Match: 1oz4A
Description: VCP/p97
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle