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View Structure Prediction Details

Protein: gi|21689821, gi|...
Organism: Arabidopsis thaliana
Length: 802 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for gi|21689821, gi|....

Predicted Domain #1
Region A:
Residues: [1-221]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRRLGWLIG LSQRSRQTKS IDAEPYVARV KPVLMIDTVQ EIAIYIHRFH NLDLFQQGWY  60
   61 QIKISMRWED GDNNSCGIPS RVVQYEALDS TSNDSYGVWK IDDKDSSFLT QPFRIKYARQ 120
  121 DVRLCMMVSF TMPLERYEGS ATSAVILKFE LLYSPIMEDI PVTHSDACAA AVHEFRIPPK 180
  181 ALSGVHSYCP VHFDTFHAVL IDVSVHVSVM KSAAYKRPAI L

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [222-464]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SSDASNGKNL TSGNIQSSKK AFTQIASADK KLVSFVKALL GARDTLLEEM QRLSKAVGQT  60
   61 VDLSEFVSSM DNALLSDSGS TGKSVEVEGS GQGKLQNNLE KLNGPFDLAS DDWLHNFSKE 120
  121 HLSRTFHLLG TQLHYLWNTF LTLHRDNYTK ILEYLRDIWT KDRRAEWSIW MVYSKVEMPH 180
  181 HFISGMEDIS NHSSHKRVST GLKLNDPAQV ASTRAELHRR SIAQMRINNR AIQDMHIFGD 240
  241 PMR

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [465-802]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VPIVIIERVW NAPRRTFSDN SYMRHVDRID SSLLNGHDDE SGTKKHINPQ HTGRELKIVV  60
   61 FVHGFQGHHL DLRLIRNQWL LIDPKIEFLM SEANEERTHG DFREMGQRLA QEVVSFFKRK 120
  121 KDKHARYGRL KNIKLSFVGH SIGNVIIRAA IADSLMDPYR KYFHTYISLS GPHLGYLYSS 180
  181 NSLFNSGLWL LKKLKSTQVI HQLTLTDDPD LQNTFFYKLC KQKTLCSFKN IILLSSPQDG 240
  241 YVPYHSARIE SCQPASFDNS KRGVAFLEML NNCMDQIRGP SPETPHHQRV FMRCDVNFDT 300
  301 TLYGRNLNSF IGRAAHIEFL ESDVFARFIM WSFQDLFR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 17.0
Match: 1s8oA
Description: Human soluble Epoxide Hydrolase
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle