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View Structure Prediction Details

Protein: gi|30678203, gi|...
Organism: Arabidopsis thaliana
Length: 353 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30678203, gi|....

Description E-value Query
Range
Subject
Range
gi|113473950, gi... - gi|71677095|ref|ZP_00674834.1| Anion-transporting ATPase [Trichodesmium erythraeum IMS101], gi|71669...
223.0 [0..19] [353..1]

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Predicted Domain #1
Region A:
Residues: [1-353]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAADLPEATV QNILDQESLK WVFVGGKGGV GKTTCSSILA ICLASVRSSV LIISTDPAHN  60
   61 LSDAFQQRFT KSPTLVQGFS NLFAMEVDPT VETDDMAGTD GMDGLFSDLA NAIPGIDEAM 120
  121 SFAEMLKLVQ TMDYATIVFD TAPTGHTLRL LQFPATLEKG LSKLMSLKSR FGGLMTQMSR 180
  181 MFGMEDEFGE DALLGRLEGL KDVIEQVNRQ FKDPDMTTFV CVCIPEFLSL YETERLVQEL 240
  241 AKFEIDTHNI IINQVLYDDE DVESKLLRAR MRMQQKYLDQ FYMLYDDFNI TKLPLLPEEV 300
  301 TGVEALKAFS HKFLTPYHPT TSRSNVEELE RKVHTLRLQL KTAEEELERV KSG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 38.045757
Match: 1f48A
Description: Arsenite-translocating ATPase ArsA
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle