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View Structure Prediction Details

Protein: DTX10_ARATH
Organism: Arabidopsis thaliana
Length: 487 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DTX10_ARATH.

Description E-value Query
Range
Subject
Range
gi|113548993, gi... - gi|115453843|ref|NP_001050522.1| Os03g0571900 [Oryza sativa (japonica cultivar-group)], gi|113548993...
321.0 [0..8] [478..622]

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Predicted Domain #1
Region A:
Residues: [1-210]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQDAERTTND PVDRIEKVTW RDLQDGSFTA ELKRLICFAA PMAAVVIIQF MIQIISMVMV  60
   61 GHLGRLSLAS ASFAVSFCNV TGFSFIIGLS CALDTLSGQA YGAKLYRKLG VQAYTAMFCL 120
  121 TLVCLPLSLL WFNMGKLIVI LGQDPAIAHE AGRYAAWLIP GLFAYAVLQP LIRYFKNQSL 180
  181 ITPLLVTSSV VFCIHVPLCW LLVYKSGLGH 

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 31.744727
Match: PF01554.9
Description: No description for PF01554.9 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [211-487]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IGGALALSLS YWLYAIFLGS FMYYSSACSE TRAPLTMEIF EGVREFIKYA LPSAAMLCLE  60
   61 WWSYELIILL SGLLPNPQLE TSVLSICFET LSITYSIPLA IAAAASTRIS NELGAGNSRA 120
  121 AHIVVYAAMS LAVMDALMVS MSLLAGRHVF GHVFSSDKKT IEYVAKMAPL VSISIILDSL 180
  181 QGVLSGVASG CGWQHIGAYI NFGAFYLWGI PIAASLAFWV HLKGVGLWIG ILAGAVLQTL 240
  241 LLALVTGCTN WKTQAREARE RMAVAHESEL TESELPI

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 30.481486
Match: PF01554.9
Description: No description for PF01554.9 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle