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View Structure Prediction Details

Protein: SSL3_ARATH
Organism: Arabidopsis thaliana
Length: 390 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SSL3_ARATH.

Description E-value Query
Range
Subject
Range
gi|6664319, gi|2... - gi|6664319|gb|AAF22901.1|AC006932_18 T27G7.16 [Arabidopsis thaliana], pir||H86217 protein T27G7.16 [...
250.0 [0..1] [390..1]

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Predicted Domain #1
Region A:
Residues: [1-390]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAMSILAKIF LVFAIYCAID PFSHSSISKF PDFKTYKIDM PPLSSLPKER DRQNLLQNSE  60
   61 IRFLNEVQGP ESIAFDPQGR GPYTGVADGR ILFWNGTRWT DFAYTSNNRS ELCDPKPSLL 120
  121 DYLKDEDICG RPLGLRFDKK NGDLYIADAY LGIMKVGPEG GLATSVTNEA DGVPLRFTND 180
  181 LDIDDEGNVY FTDSSSFFQR RKFMLLIVSG EDSGRVLKYN PKTKETTTLV RNLQFPNGLS 240
  241 LGKDGSFFIF CEGSIGRLRK YWLKGEKAGT SEVVALLHGF PDNIRTNKDG DFWVAVHCHR 300
  301 NIFTHLMAHY PRVRKFFLKL PISVKFQYLL QVGGWPHAVA VKYSEEGKVL KVLEDSKGKV 360
  361 VKAVSEVEEK DGKLWMGSVL MSFIAVYDLP 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 27.39794
Match: 2fpbA
Description: No description for 2fpbA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle